GenomeScope

Estimate genome heterozygosity, repeat content, and size from sequencing reads using a kmer-based statistical approach.

Information

The code is open source on Github: github.com/schatzlab/genomescope


Statistical work by Gregory Vurture and Fritz Sedlazeck

Web application by Maria Nattestad

Principal investigator / The Boss: Mike Schatz


For questions about the science, email: Mike Schatz at mschatz@cshl.edu

For questions about the web application, email: Maria Nattestad at mnattest@cshl.edu