Genome Assembly Performance Prediction
This is the Genome Assembly Performance Prediction Service. If you have any queries please email Hayan Lee (firstname.lastname@example.org).
Although assembly performance is a function of genome size, read length, coverage and repeats, in this prediction model, we only used 3 features; genome size, read length and coverage for the simplicity.
Given genome size, we internally set read lengths and coverages for you. With 3 features, our model predicts the expected performance of assembly. Performance is defined as follows:
Performance(%) = N50 of assembly / N50 of chromosome segments